PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG009400.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 278aa    MW: 29852.4 Da    PI: 6.7821
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG009400.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.15.1e-11114161355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       + h ++Er+RR+++ + f  L +++P +     +K +K++ L  +++Y+k+L+
  TRIDC4AG009400.2 114 QEHVIAERKRREKLQQQFVSLATIVPGL-----RKTDKISLLGSTIDYVKQLE 161
                       5799***********************9.....8*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
GMEQQFAEPP LPGHQEQYYT PPMATPSFHP SRSSDFPSFG GSSSLPNLPF GSTTVKNELG  60
QPSPPPPSSN FLSFGAGQAG TLNFSGGAWQ HDGVEGTMQL QAPERRSRAP ANAQEHVIAE  120
RKRREKLQQQ FVSLATIVPG LRKTDKISLL GSTIDYVKQL EDKVRALEEQ GSRRSSESTT  180
VFESKCRISA ADNDAAGPSG SGDAAEDSSP AVEASIRGHT ALLKICCKER RGVLVMVLSE  240
LENQGLSIIN TNVVPFTDSC LNITITAKAR LLFHCANA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120125ERKRRE
2121126RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.19e-29bHLH family protein