PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG009910.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 131aa MW: 15036 Da PI: 8.7717

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG009910.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.3	5.4e-16	26	72	2	48
SSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 + WT+eEd+ll + v++ Gg+ +W++I r ++ gR k+c++rw ++l TRIDC4AG009910.1 26 KMWTKEEDDLLREQVRRCGGPhNWDSICRGLP-GRNSKSCRLRWCQHL 72 67****************************.*********9986 PP
2	Myb_DNA-binding	49.1	1.3e-15	81	123	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T eEd l+v++ + +G++ W+tIa+ + gRt++ +k+rw+++ TRIDC4AG009910.1 81 PFTVEEDMLIVKYQAAYGNR-WSTIAEFLS-GRTDNAVKNRWNSV 123 89****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 131 aa Download sequence
MMPTSFFQGN DAGACDGDGS PHGVKKMWTK EEDDLLREQV RRCGGPHNWD SICRGLPGRN 60 SKSCRLRWCQ HLDPRVEAVK PFTVEEDMLI VKYQAAYGNR WSTIAEFLSG RTDNAVKNRW 120 NSVLRKRQEH A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	2e-36	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG009910.1