PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG009920.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 241aa    MW: 26353 Da    PI: 7.9369
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG009920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.34.1e-142571248
                      SSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  2 grWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      + WT+ Ed+ll + v++ Gg+ +W++I r ++ gR  k+c++rw ++l
  TRIDC4AG009920.1 25 KMWTKREDDLLREQVRRCGGPhNWDSICRALP-GRNSKSCRLRWCQHL 71
                      67******************************.***********9986 PP
2Myb_DNA-binding47.44.3e-1580122347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       ++T eEd l+v++ + +G++ W+tIa+ +  gRt++ +k+rw+++
  TRIDC4AG009920.1  80 PFTVEEDMLIVKYQAAYGNR-WSTIAEFLS-GRTDNAIKNRWNSV 122
                       89******************.*********.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
PSSFPATSGS DAGACDDGLP HAAKKMWTKR EDDLLREQVR RCGGPHNWDS ICRALPGRNS  60
KSCRLRWCQH LDPRVEAVKP FTVEEDMLIV KYQAAYGNRW STIAEFLSGR TDNAIKNRWN  120
SVLHKRAPTL QGPPRPLAPS ADRKAASPEV TPGCLPLFPL ASGDVRMSSR STEVVPEAET  180
CAAARECLEL FPLVPGDIRG DAGTAAPSDM SCGAGDPLTE LRIWPAARVV FDVMPLQAYR  240
M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50060.14e-34MYB family protein