PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG009920.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 177aa    MW: 19373.2 Da    PI: 6.5079
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG009920.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.22.6e-151658347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      ++T eEd l+v++ + +G++ W+tIa+ +  gRt++ +k+rw+++
  TRIDC4AG009920.2 16 PFTVEEDMLIVKYQAAYGNR-WSTIAEFLS-GRTDNAIKNRWNSV 58
                      89******************.*********.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
LRWCQHLDPR VEAVKPFTVE EDMLIVKYQA AYGNRWSTIA EFLSGRTDNA IKNRWNSVLH  60
KRAPTLQGPP RPLAPSADRK AASPEVTPGC LPLFPLASGD VRMSSRSTEV VPEAETCAAA  120
RECLELFPLV PGDIRGDAGT AAPSDMSCGA GDPLTELRIW PAARVVFDVM PLQAYRM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.14e-20MYB family protein