PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG010210.13

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 724aa MW: 79831.3 Da PI: 5.3808

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG010210.13	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.7	5.5e-08	14	56	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + +a +q G++ +++I +++ + q++++++ + TRIDC4AG010210.13 14 AWTRQEEESFFNALRQVGKN-FEKITLRVQ-SKNKDQVRHYYYRL 56 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 724 aa Download sequence
FILIAKKATR QWAAWTRQEE ESFFNALRQV GKNFEKITLR VQSKNKDQVR HYYYRLVRRM 60 KKLLGPGFSL DARNSKDTIA AMLRWWSLLE KFSCSASKLH LKPRRFKTFV DALGNQLLKD 120 RKRTRRKCSL GDTRLSSSSP VLSKTPGNQS FAVGLLPMDA QNGSKGASSK GAFMKRVAEP 180 NSNKSGVIRG DLSATRTVRQ KRRAGGAGAC AAYKKWERAA MAGVSLVADA AEELERKMTT 240 QNLSCNADAT VLASSPNNVS TVDDVGTNHM KEADPQAPSK LKLQLFPINE ATRKALEKDD 300 HNPHLELTLS SKKKMSSVLE HLNRKWGNSN IACGELVLFP YCAHQEDLAT YQRWTTQDTV 360 AVADVFFSVN SPSIFRLRYG WFSLAELEAG LSEISLTRFE NCMIPEDIQV KSSSEACVQK 420 DGTLPSDFTS EQSSNNSKDQ SALLLGTPSS TGKNAAEEPS INTFPSQSGD HNQEQVPANQ 480 AFEVDPQMDC LAISEVDWAD TLTDISVGYL LTEASKAANL DCEVTSIAKN PLFDENPCSY 540 DSFDAAVALH ASRYQAAEQP AQTSHSTIWG AEETCDEFSF MLATARKQQG LNTSASSPPD 600 SDNEVHSSNS EGFQGFLQDL AGGDTLGNPC ADDVKAMEEL CARSPPQSDN DFGLKDQPLD 660 DAFWPESLGP LDLDIPPIRS LADEFILGDS QNSWSRMMEN SMDAFRNMSF FVSDNNDSVL 720 PPIM

Sequence ? help Back to Top

Protein Sequence Length: 724 aa Download sequence

FILIAKKATR QWAAWTRQEE ESFFNALRQV GKNFEKITLR VQSKNKDQVR HYYYRLVRRM  60
KKLLGPGFSL DARNSKDTIA AMLRWWSLLE KFSCSASKLH LKPRRFKTFV DALGNQLLKD  120
RKRTRRKCSL GDTRLSSSSP VLSKTPGNQS FAVGLLPMDA QNGSKGASSK GAFMKRVAEP  180
NSNKSGVIRG DLSATRTVRQ KRRAGGAGAC AAYKKWERAA MAGVSLVADA AEELERKMTT  240
QNLSCNADAT VLASSPNNVS TVDDVGTNHM KEADPQAPSK LKLQLFPINE ATRKALEKDD  300
HNPHLELTLS SKKKMSSVLE HLNRKWGNSN IACGELVLFP YCAHQEDLAT YQRWTTQDTV  360
AVADVFFSVN SPSIFRLRYG WFSLAELEAG LSEISLTRFE NCMIPEDIQV KSSSEACVQK  420
DGTLPSDFTS EQSSNNSKDQ SALLLGTPSS TGKNAAEEPS INTFPSQSGD HNQEQVPANQ  480
AFEVDPQMDC LAISEVDWAD TLTDISVGYL LTEASKAANL DCEVTSIAKN PLFDENPCSY  540
DSFDAAVALH ASRYQAAEQP AQTSHSTIWG AEETCDEFSF MLATARKQQG LNTSASSPPD  600
SDNEVHSSNS EGFQGFLQDL AGGDTLGNPC ADDVKAMEEL CARSPPQSDN DFGLKDQPLD  660
DAFWPESLGP LDLDIPPIRS LADEFILGDS QNSWSRMMEN SMDAFRNMSF FVSDNNDSVL  720
PPIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.3	1e-163	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG010210.13