PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG010910.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 253aa MW: 26251.7 Da PI: 7.9037

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG010910.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	129	2e-40	26	126	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+a TRIDC4AG010910.2 26 PCGACKFLRRKCVSECIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLQIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQA 118 7*********************9989************************************************************* PP DUF260 93 elallkee 100 el +l+++ TRIDC4AG010910.2 119 ELTYLQTH 126 999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
GGPSGSGSGS GGGGGGGGLG GGGGGPCGAC KFLRRKCVSE CIFAPYFDSE QGAAHFAAVH 60 KVFGASNVSK LLLQIPAHKR LDAVVTICYE AQARLRDPVY GCVAHIFALQ QQVVNLQAEL 120 TYLQTHLATL ELPSPPLPAA PQMPMAMPAQ FSISDLPSTT NIPTTIDLSA LFEPPAQPQW 180 ALQQHHQHQL RQQPSYGAMA HRGGSSSMAE GSAGSGSGSG SGDLQTLARE LLDRHGRSGV 240 KPELQPPPPP HPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00220.1	2e-61	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG010910.2