PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG011440.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 555aa MW: 60798.2 Da PI: 6.4333

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG011440.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	94.6	1.2e-29	49	142	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY+ YA+++GF++r+s+ +s+r+++i++r+ vCskeg+re + kk + k++r+r+ tr+gCka+++vkk+++gkw+v+k+e+eHnH+ TRIDC4AG011440.12 49 DFYSLYARHAGFRIRISRYCRSRRDNSIISRQIVCSKEGFREVRAKKeitdEGKTKRPRMITRVGCKAMIVVKKMNSGKWMVSKFEKEHNHS 140 6****************************************99999998899999********************************9 PP FAR1 89 la 90 l TRIDC4AG011440.12 141 LL 142 96 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
LTGLPRAFTV MEISSHEPSE AEILIGHEDD TELTPCEGMQ FESEDAARDF YSLYARHAGF 60 RIRISRYCRS RRDNSIISRQ IVCSKEGFRE VRAKKEITDE GKTKRPRMIT RVGCKAMIVV 120 KKMNSGKWMV SKFEKEHNHS LLSSKQAPST SNITSGENAE FAAKSSDPDE VKVEEYSAGI 180 QCNSTDSLTV LYNQLCQEAI KFAKEGSVTE EIYHVAMSAL KEAAEKVAQV KSCHPIMPHR 240 GVSGSESKHK VVQMKTMSAS QCSDVAKQKT TPSQLTVFQE SVSKLMFIPT NLLTDSGLAN 300 SDSNHPSLCA FTSSGRQCGH GSECSYLHAE NRKEDCPEKY QNSTSSRATQ GNHSTYHGHS 360 EETTVAIPAI PLTLHMPLPR NSPGASADGQ YKLLAAPIEA VPISYRPAEP IRQPKRSFCN 420 LGPLPGVMSE LTRQEKGPHP LVHATALACG ARVVPVEEAA SLIKAIESKI RSGGAKIARL 480 PSSRLTRLVP EAISMSSSSE DGEENDHSEP PAVNVEGYCH DDQISEEMKL QGEASELETD 540 FENCSGHENH DTADC

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

LTGLPRAFTV MEISSHEPSE AEILIGHEDD TELTPCEGMQ FESEDAARDF YSLYARHAGF  60
RIRISRYCRS RRDNSIISRQ IVCSKEGFRE VRAKKEITDE GKTKRPRMIT RVGCKAMIVV  120
KKMNSGKWMV SKFEKEHNHS LLSSKQAPST SNITSGENAE FAAKSSDPDE VKVEEYSAGI  180
QCNSTDSLTV LYNQLCQEAI KFAKEGSVTE EIYHVAMSAL KEAAEKVAQV KSCHPIMPHR  240
GVSGSESKHK VVQMKTMSAS QCSDVAKQKT TPSQLTVFQE SVSKLMFIPT NLLTDSGLAN  300
SDSNHPSLCA FTSSGRQCGH GSECSYLHAE NRKEDCPEKY QNSTSSRATQ GNHSTYHGHS  360
EETTVAIPAI PLTLHMPLPR NSPGASADGQ YKLLAAPIEA VPISYRPAEP IRQPKRSFCN  420
LGPLPGVMSE LTRQEKGPHP LVHATALACG ARVVPVEEAA SLIKAIESKI RSGGAKIARL  480
PSSRLTRLVP EAISMSSSSE DGEENDHSEP PAVNVEGYCH DDQISEEMKL QGEASELETD  540
FENCSGHENH DTADC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-29	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG011440.12