PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG011440.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 538aa MW: 58630.3 Da PI: 6.935

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG011440.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.2	7.5e-20	38	125	6	90
FAR1 6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 YA++ F ++ + ++ +++ ++ + vCskeg+re + kk + k++r+r+ tr+gCka+++vkk+++gkw+v+k+e+eHnH+l TRIDC4AG011440.5 38 YAQRRDFMKHVTVKAST-LTKNSKNGQIVCSKEGFREVRAKKeitdEGKTKRPRMITRVGCKAMIVVKKMNSGKWMVSKFEKEHNHSLL 125 88888887666655554.66667899**********99999998899999********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MLQGIFTACM RDMQVFEFGS AGIPAPDMII QSFLVVLYAQ RRDFMKHVTV KASTLTKNSK 60 NGQIVCSKEG FREVRAKKEI TDEGKTKRPR MITRVGCKAM IVVKKMNSGK WMVSKFEKEH 120 NHSLLSSKQA PSTSNITSGE NAEFAAKSSD PDEVKVEEYS AGIQCNSTDS LTVLYNQLCQ 180 EAIKFAKEGS VTEEIYHVAM SALKEAAEKV AQVKSCHPIM PHRGVSGSES KHKVVQMKTM 240 SASQCSDVAK QKTTPSQLTV FQESVSKLMF IPTNLLTDSG LANSDSNHPS LCAFTSSGRQ 300 CGHGSECSYL HAENRKEDCP EKYQNSTSSR ATQGNHSTYH GHSEETTVAI PAIPLTLHMP 360 LPRNSPGASA DGQYKLLAAP IEAVPISYRP AEPIRQPKRS FCNLGPLPGV MSELTRQEKG 420 PHPLVHATAL ACGARVVPVE EAASLIKAIE SKIRSGGAKI ARLPSSRLTR LVPEAISMSS 480 SSEDGEENDH SEPPAVNVEG YCHDDQISEE MKLQGEASEL ETDFENCSGH ENHDTADC

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MLQGIFTACM RDMQVFEFGS AGIPAPDMII QSFLVVLYAQ RRDFMKHVTV KASTLTKNSK  60
NGQIVCSKEG FREVRAKKEI TDEGKTKRPR MITRVGCKAM IVVKKMNSGK WMVSKFEKEH  120
NHSLLSSKQA PSTSNITSGE NAEFAAKSSD PDEVKVEEYS AGIQCNSTDS LTVLYNQLCQ  180
EAIKFAKEGS VTEEIYHVAM SALKEAAEKV AQVKSCHPIM PHRGVSGSES KHKVVQMKTM  240
SASQCSDVAK QKTTPSQLTV FQESVSKLMF IPTNLLTDSG LANSDSNHPS LCAFTSSGRQ  300
CGHGSECSYL HAENRKEDCP EKYQNSTSSR ATQGNHSTYH GHSEETTVAI PAIPLTLHMP  360
LPRNSPGASA DGQYKLLAAP IEAVPISYRP AEPIRQPKRS FCNLGPLPGV MSELTRQEKG  420
PHPLVHATAL ACGARVVPVE EAASLIKAIE SKIRSGGAKI ARLPSSRLTR LVPEAISMSS  480
SSEDGEENDH SEPPAVNVEG YCHDDQISEE MKLQGEASEL ETDFENCSGH ENHDTADC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	3e-17	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG011440.5