PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG012270.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 432aa    MW: 45863.4 Da    PI: 8.3682
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG012270.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.6e-05187210123
                       EEETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                       y+C+ Cg++ s + +L+ H+ + H
  TRIDC4AG012270.2 187 YPCKVCGEVLSKPQQLELHQAMkH 210
                       99******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MAGGARCSSL LRGFLSLFFV MFLHVGHAGC CFSPGSASQQ HEEDDAGAAG ISSKRRKISP  60
LAFSPAVSSS TGVEERAGAR RRARHVSSLA TSLRCYIHRI FSSGGPKNAV PAGEEEETVT  120
TTVSSPLAQS VTQRQASVVL STPSSPCASP FLSPMSPQSL SVTPLVPCSP LATRQLSRSF  180
AARGDLYPCK VCGEVLSKPQ QLELHQAMKH SLSELTHLDS SMNIIRMIFL AGWGLPAAGT  240
GDPPAVRRIL RIHHNPRALS RFEEYRDLVR ARAARRCAGA SGAVVEERCI ADGNERLRFH  300
CATMLCSLGA GVCGSPYCCT CTILRHGFAG KQADVDGIAT YSSGWAAHAS LPDEVEREFA  360
FLQVRRAMLV CRVVAGRVVR GGDGDGDGDK VGYDSMVPVP PGGGGRGGED DGELLVFNPR  420
AVLPCFVIMY GS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.12e-53C2H2 family protein