PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG013740.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 227aa    MW: 23742.2 Da    PI: 7.5005
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG013740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.50.000561591971154
                       HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       +R +++ +++  L++l+ +      +K + a++L +A  +I++L
  TRIDC4AG013740.1 159 KRSQKLGDKITALQQLVSPY-----GKTDTASVLHEAAACIRNL 197
                       7899999**********999.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MWNCSAPSSL LLPFSDDYVK CESSNSAPGS AGFDGISRLA ADYGHLCHHM SSLQSLPAPA  60
LFATRSSESY FGMGDGSAYG GDGRPAAFMH FGYAQTQPPT AATHPVRWTA AGGESETMVC  120
DGSSFSGSKR RKTTTTDSRL QGSSAKPRNT TAAAKAPCKR SQKLGDKITA LQQLVSPYGK  180
TDTASVLHEA AACIRNLHDQ IQILAAPYPG ESGSSSPPSS SRDAGEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.11e-17bHLH family protein