PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG016360.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 346aa MW: 37722.9 Da PI: 5.017

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG016360.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.8	5.1e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEd++l+++++++G g+W++ ++ g+ R++k+c++rw +yl TRIDC4AG016360.3 14 RGRWTAEEDDILANYIAKHGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	56.1	8.4e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eEd+l+v++++ lG++ W++Ia++++ gRt++++k++w+++l TRIDC4AG016360.3 67 RGNISKEEDDLIVKLHATLGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGRAPCCEKV GLKRGRWTAE EDDILANYIA KHGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRDGVRRGNI SKEEDDLIVK LHATLGNRWS LIASHLPGRT DNEIKNYWNS HLSRQIHTFR 120 RIYTAVSDTA ITVDVNKLSA AGKRRGGRTP GQSPRSSTKK KPVPEPITKA KDESSPAGAA 180 SSVSSSPHSD EARSAVVDPD QNQPNNSISV SHTSDGPCSE DGTWPMVMDP VDQTGVLEAN 240 CTVDQQMGLW EVNSSMNQIG IMEDESEMQA LLSSSVTAEN GLVGIDPGGL SQVDDLLDMD 300 WEGFASHLWD QPAQNGLLQP AEPQAAKGSE SDELESFVSW LLSDAC

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGRAPCCEKV GLKRGRWTAE EDDILANYIA KHGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRDGVRRGNI SKEEDDLIVK LHATLGNRWS LIASHLPGRT DNEIKNYWNS HLSRQIHTFR  120
RIYTAVSDTA ITVDVNKLSA AGKRRGGRTP GQSPRSSTKK KPVPEPITKA KDESSPAGAA  180
SSVSSSPHSD EARSAVVDPD QNQPNNSISV SHTSDGPCSE DGTWPMVMDP VDQTGVLEAN  240
CTVDQQMGLW EVNSSMNQIG IMEDESEMQA LLSSSVTAEN GLVGIDPGGL SQVDDLLDMD  300
WEGFASHLWD QPAQNGLLQP AEPQAAKGSE SDELESFVSW LLSDAC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	9e-75	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG016360.3