PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG016360.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 253aa    MW: 27896.2 Da    PI: 9.1409
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG016360.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.53.1e-181461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rgrWT+eEd++l+++++++G g+W++ ++  g+ R++k+c++rw +yl
  TRIDC4AG016360.4 14 RGRWTAEEDDILANYIAKHGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                      8*******************************99************97 PP
2Myb_DNA-binding49.31.2e-1567138148
                       TSSS-HHHHHHHHHHHHHTTTT.........................-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg.........................tWktIartmgkgRtlkqcksrwqkyl 48 
                       rg+ ++eEd+l+v++++ lG++                          W++Ia++++ gRt++++k++w+++l
  TRIDC4AG016360.4  67 RGNISKEEDDLIVKLHATLGNRenactgrdrcrvlsrvetcfeeslsEWSLIASHLP-GRTDNEIKNYWNSHL 138
                       7899*****************************************************.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MGRAPCCEKV GLKRGRWTAE EDDILANYIA KHGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRDGVRRGNI SKEEDDLIVK LHATLGNREN ACTGRDRCRV LSRVETCFEE SLSEWSLIAS  120
HLPGRTDNEI KNYWNSHLSR QIHTFRRIYT AVSDTAITVD VNKLSAAGKR RGGRTPGQSP  180
RSSTKKKPVP EPITKAKDES SPAGAASSVS SSPHSDEARS AVVDPDQNQP NNSISVSHTS  240
DGPCSEDGTW PMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.11e-69MYB family protein