PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG016550.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 319aa    MW: 35133 Da    PI: 4.563
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG016550.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.81.1e-172269148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd  lv++++ +G g+W++ ar  g++Rt+k+c++rw++yl
  TRIDC4AG016550.2 22 RGPWTVEEDIVLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 69
                      89********************************************97 PP
2Myb_DNA-binding51.32.6e-1675118146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
  TRIDC4AG016550.2  75 RGSITPQEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 118
                       7889******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MDMAHERDSS SEEEVMAGDL RRGPWTVEED IVLVNYIAAH GEGRWNSLAR SAGLKRTGKS  60
CRLRWLNYLR PDLRRGSITP QEQLLILELH SRWGNRWSKI AQHLPGRTDN EIKNYWRTRV  120
QKHAKQLKCD VNSQQFKDVM RYLWMPRLVE RIQAAATADA VQAAADTPLS WQHGADDALY  180
ESPELPVDAC WPAEYAAVAG GQLPNASVAE LSSTTTAGSS SPSTTDSGAG AQPSWPAAVD  240
GAEWFTTACD ASSAAATICD TDQLIQQQAP SQPAGAWTSE PLPSLGFPEL GVADFEMGSF  300
DVDSIWSMDD LWNTQPQFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.12e-83MYB family protein