PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG016550.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 198aa    MW: 22747.1 Da    PI: 11.1074
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG016550.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.94.9e-182067148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd  lv++++ +G g+W++ ar  g++Rt+k+c++rw++yl
  TRIDC4AG016550.3 20 RGPWTVEEDIVLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 67
                      89********************************************97 PP
2Myb_DNA-binding52.51.2e-1673116146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
  TRIDC4AG016550.3  73 RGSITPQEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 116
                       7889******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MAHERDSSSE EEVMAGDLRR GPWTVEEDIV LVNYIAAHGE GRWNSLARSA GLKRTGKSCR  60
LRWLNYLRPD LRRGSITPQE QLLILELHSR WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK  120
HAKQLKCDVN SQQFKDVMRY LWMPRLVERI QAAATADARS TPPWPAGSCP TPRSRSCRAL  180
LPPALPRRPP RTLAPAPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.18e-86MYB family protein