PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG016710.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 253aa    MW: 27938.2 Da    PI: 6.399
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG016710.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.8e-1674125155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a++k++g
  TRIDC4AG016710.4  74 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAALKFRG 125
                       78****************988532...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
CGDYYSVYLG GYEKEDRAAR AYDLAALKYW GVNATTNFPK ENYIRELEEM QNMSRHELVA  60
SLRRKSSGFS RGASVYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFATEE EAAEAYDIAA  120
LKFRGDNAVT NFEPSRYNLE AIACSDLPVN GRRMSSHKPT AAAAPEAQGE ITFVSSAPPI  180
PQQSCSDVQV PPYVLHGLLQ LQASEPLHAL PLSSYSFGEP SFYWPFGDVE QKVQLDSKVE  240
VAGGILQLAN SAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.14e-58AP2 family protein