PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG018030.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 354aa MW: 39677.8 Da PI: 8.3718

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG018030.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.2	2.1e-34	47	101	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rFveav+qLGG++kAtPkti++lm+v+gLtl+h+kSHLQkYRl TRIDC4AG018030.1 47 KPRLKWTPELHDRFVEAVNQLGGPDKATPKTIMRLMGVPGLTLYHLKSHLQKYRL 101 79****************************************************8 PP
2	Myb_DNA-binding	71.7	1.2e-22	49	100	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++++v+av+qlGg+ t+ktI+r mg g+tl+++ks++qky+ TRIDC4AG018030.1 49 RLKWTPELHDRFVEAVNQLGGPdkaTPKTIMRLMGvPGLTLYHLKSHLQKYR 100 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MYHHQQQLQS HNQLLASRQT FPSERHLLLQ GGIIPGESGL ILSTDAKPRL KWTPELHDRF 60 VEAVNQLGGP DKATPKTIMR LMGVPGLTLY HLKSHLQKYR LSKNLHVQAN VGNSRTAAGC 120 TIATEKQSEG NGSPVGHHLN TQTNKSMHIG EALQMQIEVQ RRLHEQLEVQ RHLQLRIEAQ 180 GKYLQSVLEK AHETLAKQNT GSGGLETAKM QLSELVSKVS TECFHNAFTS FEEIEGSQML 240 RRQTMQLGDG SVDSCLTACE GSQKDQDILS MSLSAQKGKE IGGMAFDLQM KERGHEDLFL 300 NKLSRRPPNH HEGHERRDSL SMTYQATKLD LNMNDTNNGT QNSKKFDLNG FSWS

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MYHHQQQLQS HNQLLASRQT FPSERHLLLQ GGIIPGESGL ILSTDAKPRL KWTPELHDRF  60
VEAVNQLGGP DKATPKTIMR LMGVPGLTLY HLKSHLQKYR LSKNLHVQAN VGNSRTAAGC  120
TIATEKQSEG NGSPVGHHLN TQTNKSMHIG EALQMQIEVQ RRLHEQLEVQ RHLQLRIEAQ  180
GKYLQSVLEK AHETLAKQNT GSGGLETAKM QLSELVSKVS TECFHNAFTS FEEIEGSQML  240
RRQTMQLGDG SVDSCLTACE GSQKDQDILS MSLSAQKGKE IGGMAFDLQM KERGHEDLFL  300
NKLSRRPPNH HEGHERRDSL SMTYQATKLD LNMNDTNNGT QNSKKFDLNG FSWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-105	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG018030.1