PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG018100.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 342aa MW: 37645.3 Da PI: 5.9665

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG018100.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.2	4.4e-55	23	150	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdee++++yL++k+ ++++ vi evd++k+ePw+Lp k+k +ekewyfF+++d+ky+tg+r+nrat+sgyWkatgkdke++ TRIDC4AG018100.1 23 LPPGFRFHPTDEEIISHYLTPKALDHRFCS-GVIGEVDLNKCEPWHLPGKAKMGEKEWYFFCHKDRKYPTGTRTNRATESGYWKATGKDKEIF 114 79***********************888.89***********99999************************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129 + +g lvg+kktLvfy grap+gekt Wvmhe+rle TRIDC4AG018100.1 115 RGRGLLVGMKKTLVFYLGRAPRGEKTGWVMHEFRLE 150 9******************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MSEASVINQA EVEDAAAAAG LDLPPGFRFH PTDEEIISHY LTPKALDHRF CSGVIGEVDL 60 NKCEPWHLPG KAKMGEKEWY FFCHKDRKYP TGTRTNRATE SGYWKATGKD KEIFRGRGLL 120 VGMKKTLVFY LGRAPRGEKT GWVMHEFRLE GKLPHPLPRS AKDEWAVSKV FNKELTATNG 180 AMAAADAGIE RVSSFGFITD FLDSGELPPL MDPPLGGDVD QVTDFKSTSA YATGAHSGHQ 240 VKMEQHMPQQ PPHMMYSSPY FSLPAANSGD MSPAIRRYCK AEQVSGQTSA LSPSRETGLS 300 TDPNAAGCAE ISSAATPSSQ NQEFLDEFDE YPALNLADIW KY

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MSEASVINQA EVEDAAAAAG LDLPPGFRFH PTDEEIISHY LTPKALDHRF CSGVIGEVDL  60
NKCEPWHLPG KAKMGEKEWY FFCHKDRKYP TGTRTNRATE SGYWKATGKD KEIFRGRGLL  120
VGMKKTLVFY LGRAPRGEKT GWVMHEFRLE GKLPHPLPRS AKDEWAVSKV FNKELTATNG  180
AMAAADAGIE RVSSFGFITD FLDSGELPPL MDPPLGGDVD QVTDFKSTSA YATGAHSGHQ  240
VKMEQHMPQQ PPHMMYSSPY FSLPAANSGD MSPAIRRYCK AEQVSGQTSA LSPSRETGLS  300
TDPNAAGCAE ISSAATPSSQ NQEFLDEFDE YPALNLADIW KY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04060.1	6e-81	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG018100.1