PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG018280.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 365aa MW: 40273.2 Da PI: 7.7353

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG018280.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.3	8.5e-34	231	285	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fv+ v++LGGsekAtPk +l+lmkv+gLt++hvkSHLQkYR+ TRIDC4AG018280.2 231 KQRMRWTPELHECFVDSVNKLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRT 285 79****************************************************8 PP
2	Myb_DNA-binding	51.1	3e-16	233	284	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +vd v++lGg t+k + + m g+t +++ks++qky+ TRIDC4AG018280.2 233 RMRWTPELHECFVDSVNKLGGSekaTPKGVLKLMKvDGLTIYHVKSHLQKYR 284 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MRRCDLRQSH NSRVSGGMSS SLPILPNSLK ETFHGPYNPQ LTPMQRQLTS DLVPLHQSAL 60 PSATLHPRAG AMRSSYAASL GYSPNPLDSA PNHERQSMVA PFAPQPSDIE VFQTLSNNIP 120 GGHTGATWFP GSADGLSDYR DNIPASGSQI QNGGPAVTSD VVAKQNEWWA EIMNDDWRDI 180 LDATAADPQS KSMVQPSNSA ASQPAVNQPA SSHGGEICNV ASPPNSNSAA KQRMRWTPEL 240 HECFVDSVNK LGGSEKATPK GVLKLMKVDG LTIYHVKSHL QKYRTARYKP DLTEGTAEKR 300 TTTEELTLDL KSSMDLTEAL RLQMEVQKRL HEQLETQRKL QLRIEEQGKY LQMMFEKQSK 360 SNTEK

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MRRCDLRQSH NSRVSGGMSS SLPILPNSLK ETFHGPYNPQ LTPMQRQLTS DLVPLHQSAL  60
PSATLHPRAG AMRSSYAASL GYSPNPLDSA PNHERQSMVA PFAPQPSDIE VFQTLSNNIP  120
GGHTGATWFP GSADGLSDYR DNIPASGSQI QNGGPAVTSD VVAKQNEWWA EIMNDDWRDI  180
LDATAADPQS KSMVQPSNSA ASQPAVNQPA SSHGGEICNV ASPPNSNSAA KQRMRWTPEL  240
HECFVDSVNK LGGSEKATPK GVLKLMKVDG LTIYHVKSHL QKYRTARYKP DLTEGTAEKR  300
TTTEELTLDL KSSMDLTEAL RLQMEVQKRL HEQLETQRKL QLRIEEQGKY LQMMFEKQSK  360
SNTEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-72	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG018280.2