PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG027670.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 208aa    MW: 22981.5 Da    PI: 6.7933
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG027670.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.54.6e-1114401946
                      TTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqk 46
                      lG ++W++Ia++++ gRt++++k++w++
  TRIDC4AG027670.3 14 LGQPRWSKIAQHLP-GRTDNEIKNYWRT 40
                      8999**********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
RRRAAPHPRP PLSLGQPRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKQLN CDVGSATFKD  60
AMRYLWMPRL VERIHAAAGD PTIGDTSCAS GVRSMATTAA TATTYPENNS AASAVTTSRS  120
ASSGSFTSEL CGEEKNLHVH GSGEKTTSGG DWMQEADQEF WAMHMQIQPE DGGLFHVDHE  180
LSGWVQGFSD VGVSADNLWS LEDIWKMQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.18e-34MYB family protein