PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG027670.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 255aa MW: 28332.4 Da PI: 6.1702

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG027670.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.9	2e-17	36	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed+ l+++++ +G g+W++ ar g++Rt+k+c++rw++yl TRIDC4AG027670.5 36 RGPWTVDEDLTLINYIADHGEGRWNALARAAGLRRTGKSCRLRWLNYL 83 89********************************************97 PP
2	Myb_DNA-binding	56	9.3e-18	89	132	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC4AG027670.5 89 RGNFTADEQLLILDLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 132 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
PATSSMDVVL QSRSSNSMAA EPEEEAEPEE EAELRRGPWT VDEDLTLINY IADHGEGRWN 60 ALARAAGLRR TGKSCRLRWL NYLRPDVKRG NFTADEQLLI LDLHSRWGNR WSKIAQHLPG 120 RTDNEIKNYW RTRVQKHAKQ LNCDVGSATF KDAMRYLWMP RLVERIHAAA GDPTIGDTSC 180 ASGVRSMATT AATATTYPEN NSAASAVTTS RSASSGSFTS ELCGEEKNLH VHGSGEKTTS 240 GGDWMQEADQ EFWAM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	3e-68	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG027670.5