PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG027860.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 182aa    MW: 20812.8 Da    PI: 8.5762
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG027860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding322.9e-1022522248
                      T.....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding 22 g.....tWktIartmgkgRtlkqcksrwqkyl 48
                      +     +W++Iar+++ gRt++++k++w++++
  TRIDC4AG027860.1 22 NtlsmyRWSRIARRLP-GRTDNEIKNYWRTHM 52
                      2555557*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
FDTKEDLTKA AFFHLQQMKR TNTLSMYRWS RIARRLPGRT DNEIKNYWRT HMRKKAQERK  60
IDMSPSSSSS SFTYQSCLLE TAPIIRMDGG STHNGTTCFS SVLKSNQSVM DGYSMDQIWK  120
EIEAPAMLPI DDKACSNLPC PLLPSPMGDR YCPPEVVWKM DNGDLKMLAP QFGYGNGERS  180
CY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.17e-20MYB_related family protein