PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG027860.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 164aa    MW: 18246.8 Da    PI: 4.7493
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG027860.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.41.8e-091044133
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..T CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..k 33
                      +g+WT++Ed++lv+ v+++G ++W+ +a+  g   
  TRIDC4AG027860.2 10 KGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGlrG 44
                      79***************************999554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MVTVQDEMRK GPWTEQEDLQ LVCTVRLFGD RRWDFVAKVS GLRGGRPSSS SSSFTYQSCL  60
LETAPIIRMD GGSTHNGTTC FSSVLKSNQS VMDGYSMDQI WKEIEAPAML PIDDKACSNL  120
PCPLLPSPMG DRYCPPEVVW KMDNGDLKML APQFGYGNGE RSCY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.31e-16MYB family protein