PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG027860.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 165aa    MW: 18791.5 Da    PI: 8.7923
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG027860.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.86.8e-1011352348
                      -HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                      +W++Iar+++ gRt++++k++w++++
  TRIDC4AG027860.8 11 RWSRIARRLP-GRTDNEIKNYWRTHM 35
                      6*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MKRTNTLSMY RWSRIARRLP GRTDNEIKNY WRTHMRKKAQ ERKIDMSPSS SSSSFTYQSC  60
LLETAPIIRM DGGSTHNGTT CFSSVLKSNQ SVMDGYSMDQ IWKEIEAPAM LPIDDKACSN  120
LPCPLLPSPM GDRYCPPEVV WKMDNGDLKM LAPQFGYGNG ERSCY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.19e-20MYB_related family protein