PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG028110.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 152aa MW: 16261.6 Da PI: 11.6125

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG028110.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00038	41	63	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C Cg++F + +L H +H TRIDC4AG028110.1 41 YECRTCGRRFATFQSLGGHRTSH 63 99**********99999998887 PP
2	zf-C2H2	17.4	1.2e-05	91	113	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg+ F++ L H+r+H TRIDC4AG028110.1 91 HRCGTCGQAFPTGQALGGHMRRH 113 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 152 aa Download sequence
GDARSPIKLI ELLLKLSSPA ASSRVIGKNK RVQLQAAGGA YECRTCGRRF ATFQSLGGHR 60 TSHKRPRVRA HGLDLLLGAR PGKARAPVQL HRCGTCGQAF PTGQALGGHM RRHRPAVAAA 120 TWTETATSSS TSCLSVSGQH DDADWPTLIQ FI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	7e-23	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG028110.1