PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028340.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 776aa    MW: 85346 Da    PI: 6.7627
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028340.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3312.3e-1013917661373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av++gd++  ++lL ++++++sp+gd++qRla +f+e+L+arla+++s++y++l +++ts   + e l a+kl+  +s + k+
  TRIDC4AG028340.5 391 LRTMLIHCAQAVATGDHRGSNELLRQIKQHSSPKGDATQRLAYCFAEGLEARLAGTGSHVYRSLVAKSTS---VGEFLRAYKLYMAASSFRKV 480
                       5789***************************************************************999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        ++   + I++a+ g++r+Hi+D+++++G+QWp Llq La+R++gpp++RiTg++ p++g   + ++eetg+rL+k A+e+gvpf+++  +  
  TRIDC4AG028340.5 481 NFIFVGKIIMDAMVGKSRLHIVDYNVEYGFQWPDLLQMLAEREGGPPEVRITGIDVPQPGfrPAFQIEETGRRLSKCAQEFGVPFRYHG-IPA 572
                       ***********************************************************999***************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       +le+++ e+L+++p+E+l+V ++    +l+desv ++      +rd vL  +++++P+v++ +  +  ++++ F++rf eal +ysa fd+l+
  TRIDC4AG028340.5 573 KLETVHAEDLNIDPNEVLIVTSQCGFSNLMDESVIMDRqdipsPRDMVLTNIRNMRPDVFIDCVVNGTYSAPFFVTRFREALFTYSAQFDMLD 665
                       ******************************99887665555669************************************************* PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                       a++pr++++r  +Er ++g+ + nv+acega+r+ r et+++W+ r ++aG+++vpls+ ++k +k  ++  + + + ++ ++ +l++gWk+r
  TRIDC4AG028340.5 666 ATIPRDNDDRLLIERDIFGPCALNVIACEGADRVDRPETYKQWQVRGHRAGLRQVPLSSAVVKLVKDKVKSLYHKDFLIDVDNRWLLQGWKGR 758
                       *************************************************************************888***************** PP

              GRAS 366 pLvsvSaW 373
                        L+++S W
  TRIDC4AG028340.5 759 VLYAMSTW 766
                       ******** PP
Sequence ? help Back to Top
Protein Sequence    Length: 776 aa     Download sequence    
PTPSPPRAPA SDDLDFISRM LMEEDIDDRF FYQYPDHPAI LSAQHRFAQI ISDSNTNPST  60
DDSAVASSTF SSDSATARSA SSCSDSATNT AKSTSSSHSA TTNTANSTSC SPSPGGFGPA  120
NPTWPYERID LSQPLHSPPY IGLGFPVDGA NNLLFSGVST PTSGYFGHTP ALSRGNSNHF  180
VAPAGQNGRS TGIQSFATFS NSSATKDAKT LSNNATAKAA KPATQAACRG GPGTPASAFF  240
FNGQTDGDMD MLNMAFRKGM EEANKFLPTN NTLDAISNRP ALRDLTCDQL KKEEADRLRM  300
LMFSNGRGRK NRHGVEDLEA EAGRRSKLMM PEQEESGVGE MVEEIMLHGH DIIMKGIEDL  360
QIAMGTEAEK NHRKGTGKAA RGRRGATEVD LRTMLIHCAQ AVATGDHRGS NELLRQIKQH  420
SSPKGDATQR LAYCFAEGLE ARLAGTGSHV YRSLVAKSTS VGEFLRAYKL YMAASSFRKV  480
NFIFVGKIIM DAMVGKSRLH IVDYNVEYGF QWPDLLQMLA EREGGPPEVR ITGIDVPQPG  540
FRPAFQIEET GRRLSKCAQE FGVPFRYHGI PAKLETVHAE DLNIDPNEVL IVTSQCGFSN  600
LMDESVIMDR QDIPSPRDMV LTNIRNMRPD VFIDCVVNGT YSAPFFVTRF REALFTYSAQ  660
FDMLDATIPR DNDDRLLIER DIFGPCALNV IACEGADRVD RPETYKQWQV RGHRAGLRQV  720
PLSSAVVKLV KDKVKSLYHK DFLIDVDNRW LLQGWKGRVL YAMSTWVAGD HDISKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-139GRAS family protein