PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028370.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 549aa    MW: 61916.3 Da    PI: 6.473
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028370.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS323.64e-991715402373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cA+av + d + a +lL++++++asp+gd++qRla  f+e+L+arl++++s++y  l+++ ts   ++++++a++lf  ++ + k++
  TRIDC4AG028370.6 171 HTLLIHCAKAVMD-DRRSAGELLKEIKQHASPTGDATQRLAYWFAEGLEARLTSTGSQVYGLLTAECTS---TVRHMQAYQLFMSTCCFRKVA 259
                       679********97.8999******************************************999998888...899****************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +l aN+aI +a+ g +r+Hi+D+++  G+QWp Ll+ LasR++gpp++RiT ++ p +g   ++ +e++g+rL+++A+elgvpf++++ ++ +
  TRIDC4AG028370.6 260 FLFANKAIFNAAVGRSRLHIVDYGLHCGFQWPELLRWLASRDGGPPEVRITHIELPLPGvyPEKHMEQIGNRLTDIAQELGVPFKYRA-IMAQ 351
                       ********************************************************99999***************************.6999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       ++++ +e+L+ +p+EalaVn +++  +l+desv ++s  +rd+vL  + +++P+v+v +  + ++ ++ Fl rf eal y+salfd+l+a++p
  TRIDC4AG028370.6 352 WQTICVEDLDKEPDEALAVNDQFNFRTLMDESVVIASpnPRDAVLGNISKMKPDVFVQSTVNGSY-GTFFLSRFREALFYHSALFDMLDATMP 443
                       *********************************9998889***********************99.789************************ PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       res+ r  +Er ++g+ + n+va eg++r+er et+++W+ r ++aG++++pl+ +++k a  ++   + + + ++e++++l++gWk+r L++
  TRIDC4AG028370.6 444 RESKLRLALERDVFGWMVLNAVAYEGEDRVERGETYKHWQIRNQRAGLRQLPLNRETVKMATDMVMGDYHKDFDIDEDHQWLLQGWKGRILYA 536
                       **********************************************************99998888877677********************* PP

              GRAS 370 vSaW 373
                        S W
  TRIDC4AG028370.6 537 HSTW 540
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    
MKEEDDVDED SPALLKAQRP FAQILSSSMH ASTLMADQGG ALAIDVHSPS SPIFKFKGVD  60
EVHSLMLLPD ADYSTHMFSI AFLRGMEEAN KFLPRNCELT TTGGHDQPKE KSGRGRKDRH  120
GEVEADVSRT SRLVEVGAGE VFDQMLIAHG NETGNSNKKG RKSKTRVVDL HTLLIHCAKA  180
VMDDRRSAGE LLKEIKQHAS PTGDATQRLA YWFAEGLEAR LTSTGSQVYG LLTAECTSTV  240
RHMQAYQLFM STCCFRKVAF LFANKAIFNA AVGRSRLHIV DYGLHCGFQW PELLRWLASR  300
DGGPPEVRIT HIELPLPGVY PEKHMEQIGN RLTDIAQELG VPFKYRAIMA QWQTICVEDL  360
DKEPDEALAV NDQFNFRTLM DESVVIASPN PRDAVLGNIS KMKPDVFVQS TVNGSYGTFF  420
LSRFREALFY HSALFDMLDA TMPRESKLRL ALERDVFGWM VLNAVAYEGE DRVERGETYK  480
HWQIRNQRAG LRQLPLNRET VKMATDMVMG DYHKDFDIDE DHQWLLQGWK GRILYAHSTW  540
VAEGASSHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-126GRAS family protein