PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028390.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 498aa    MW: 55715.1 Da    PI: 5.4852
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028390.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS238.33.3e-732094982291
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cA+av + d ++a +lL++++++asp+gd++qRla  f+e+L+arl++++s++y +l+++ ts    + +  a++ f  ++ + ++s
  TRIDC4AG028390.1 209 HTLLIHCAKAVMD-DRRRAGELLKEIQQHASPTGDATQRLAYWFAEGLEARLTGTGSQVYGTLTAKGTS---AVAHSEAYQEFISACCFRNVS 297
                       679********97.999**********************************************999999...899999*************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +l aN+aI +a+ g +r+Hi+D++  +G+QW  Ll+ La+R++gpp++RiT ++ p++g   ++ ++e+  rL+++A+elgv+f++++ +  +
  TRIDC4AG028390.1 298 FLFANRAIFNAAVGRSRLHIVDYGFRYGFQWSELLRWLAARDGGPPEVRITHIDLPQPGfhPEKHMKEIDCRLTDIARELGVSFKYRA-ILAQ 389
                       **********************************************************9999**************************.6899 PP

              GRAS 186 ledleleeLrvkp..gEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                       ++++++e+L+++   +E+laVn  ++  +l+desv + s  +rd+vL+ + +++P+v+v +  + ++ ++ Fl rf eal +ysalfd+l+a+
  TRIDC4AG028390.1 390 WQTVSIEDLDLDLgpDEVLAVNDLYNFRTLMDESVVIGSpnPRDTVLSNISKMKPDVFVQSTVNGSY-GTFFLSRFREALFFYSALFDMLDAT 481
                       *******99877666********************9988779***********************99.789********************** PP

              GRAS 275 lpreseerikvErellg 291
                       +pre++ r  +Er ++g
  TRIDC4AG028390.1 482 MPRENKLRLALERNIFG 498
                       *************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    
MAVPRIFPDL PLVAHHDRNR SAMQDHLALP NIAHILMEED DDIDEDNPAL LKAQRPFAQI  60
LSSSMHASTL MADQGGALAS DMHSPSSGIL KFKGVDEVRS LLLLANGEFS TDIFSTAFLK  120
GMEEAKKFLP TNSELTTTGE QDQPMEKSSR GRKDWSDEVE ADVSRTDRLV EAGACEVFDF  180
NQMCSSMDNE TGNSNKKGRK SKARVIDLHT LLIHCAKAVM DDRRRAGELL KEIQQHASPT  240
GDATQRLAYW FAEGLEARLT GTGSQVYGTL TAKGTSAVAH SEAYQEFISA CCFRNVSFLF  300
ANRAIFNAAV GRSRLHIVDY GFRYGFQWSE LLRWLAARDG GPPEVRITHI DLPQPGFHPE  360
KHMKEIDCRL TDIARELGVS FKYRAILAQW QTVSIEDLDL DLGPDEVLAV NDLYNFRTLM  420
DESVVIGSPN PRDTVLSNIS KMKPDVFVQS TVNGSYGTFF LSRFREALFF YSALFDMLDA  480
TMPRENKLRL ALERNIFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.18e-92GRAS family protein