PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028480.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 643aa    MW: 71901.1 Da    PI: 7.0824
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028480.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS332.21e-1012606322373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cAeav+++d ++a  lL+++++++ p+gd+ qRla yf+e+L+arla+++ ++y+++++ + +  +++e +++++l   ++ +lk+s
  TRIDC4AG028480.2 260 ETLLIRCAEAVATNDRSNAGDLLKKIKQHSLPTGDARQRLAYYFAEGLEARLAGTGRQIYHSITAANHT--STVELFKSYHLCIAACCFLKVS 350
                       789**********************************************************99887776..599999**************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                           N+ I++av+g +++Hi+ ++++ G+QWp Ll+ La+R++gpp++RiTg+ sp++g    ++ +et++rL+  A+++gvpf+f++ +  +
  TRIDC4AG028480.2 351 LNFSNKNIYNAVAGRKKLHIVHYGVNDGFQWPDLLRWLADREGGPPEVRITGIISPQPGpcPVKQAKETKRRLSYCARQFGVPFKFHA-IIAK 442
                       ************************************************************99**************************.6999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvs..leserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       le+++ e+L+++p+E+l+Vn +++  +l+des++  +e++rd vL+++++++P +++++  +  ++s+ F++rf +al+ ++a fd++e+++ 
  TRIDC4AG028480.2 443 LETVHAEDLDIDPDEVLVVNNMFHFRTLMDESLTfdMENPRDLVLNTIRKMKPSMLIHAAVNGAYSSAFFMTRFRQALNNFTAQFDMMESTMM 535
                       *******************************98622677****************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       +++++r  vEr++++r+++n++aceg +r+er +++++W++r ++aG+++++l+ +++k  k  ++k + + ++++e++ +l+lgWk+r L++
  TRIDC4AG028480.2 536 QNKDKRLLVERHIFARSVMNIIACEGPDRVERPQNYKEWHARNQRAGLRQLSLDPDIVKMLKDQVKKQYHKHFMIDEDQRWLLLGWKGRVLYA 628
                       *********************************************************************999********************* PP

              GRAS 370 vSaW 373
                       +S W
  TRIDC4AG028480.2 629 LSTW 632
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 643 aa     Download sequence    
MAPAQEEPLG LVKPAPPPPP PSFFLDQPSI TNGGSQSQQP QDDLALAYIS RMLMEEDITD  60
KFFYQHPEHP TLLQAEQPFA EILSASGIAT AGAHGSSALL PSQGNNTGIM ASAFLSSEVH  120
SPPLFLNGTV TAEAPRSGVT MGDLSSMAFF KGMEEANSFL PTVNVMVDAR GRKKRSGMDS  180
ETEACMGRSS KQIAVRVLAH NDSEEEETAL ELDLLILNGY DMYSNETMKE RGGQAAHQSI  240
CRKAPCVRHS ARQMVVADLE TLLIRCAEAV ATNDRSNAGD LLKKIKQHSL PTGDARQRLA  300
YYFAEGLEAR LAGTGRQIYH SITAANHTST VELFKSYHLC IAACCFLKVS LNFSNKNIYN  360
AVAGRKKLHI VHYGVNDGFQ WPDLLRWLAD REGGPPEVRI TGIISPQPGP CPVKQAKETK  420
RRLSYCARQF GVPFKFHAII AKLETVHAED LDIDPDEVLV VNNMFHFRTL MDESLTFDME  480
NPRDLVLNTI RKMKPSMLIH AAVNGAYSSA FFMTRFRQAL NNFTAQFDMM ESTMMQNKDK  540
RLLVERHIFA RSVMNIIACE GPDRVERPQN YKEWHARNQR AGLRQLSLDP DIVKMLKDQV  600
KKQYHKHFMI DEDQRWLLLG WKGRVLYALS TWVADDASGS QLE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1282287LKKIKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-121GRAS family protein