PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG029720.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 446aa    MW: 50195.9 Da    PI: 6.8962
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG029720.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS272.61.2e-83214334374
              GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfsh 95 
                       +L+ec  +v +g++e++++ L ++++las  + p+qRl   ++  La+rl+   ++ ++al  ps+    +++   +a++ f  +sP+l  ++
  TRIDC4AG029720.1  21 ALYECMAHVIEGSFEKTDRSLRKIRKLASLVDGPLQRLSMIIADSLARRLLCPIQGFAAALiDPSRYL--EQACLRSARENFASISPYLSTGF 111
                       799*************************************************8888887774444443..46666678888************ PP

              GRAS  96 ltaNqaIleavegeervHiiDfdis..qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                       +t N+a+le v+ ++ v i+D++ s  ++ QW+ +l+ +  Rp+gpp+lR+T+v++    ++e l +++  L + A++l++ f f+  v  +l
  TRIDC4AG029720.1 112 VTINRAMLEQVQDQKVVRIVDLSCSttHPWQWLKILHDFHGRPGGPPELRLTVVHE----DSEFLDNMQALLCRQAANLKLCFYFDK-VIGKL 199
                       **********************8643389***************************....9**************************.68899 PP

              GRAS 187 edleleeL....rvkpgEalaVnlvlqlhrll...........................................desvsleserdevLklvk 232
                       e+l++++L    +++ gEa++++++lq+hrll                                           + + +++s   ++L++++
  TRIDC4AG029720.1 200 ETLDFSNLreilKINFGEAVVISCALQMHRLLavddsvsrdgiaqlqqmanmarlkqmacsacspastlnypqtpSPQRQIPSLLVSFLSAIR 292
                       9999998843335555********************************************************998667777778899****** PP

              GRAS 233 slsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFk 325
                        l+Pk++v++eq+adhn++ F +rf+++++yy+alfdsl+a   ++s +r+ vEr+llg+ei+n++ ceg +r erhe+l++W++ ++++   
  TRIDC4AG029720.1 293 ALEPKIIVMMEQDADHNAPLFHDRFTKTVDYYAALFDSLNAV-DSASPQRARVERVLLGEEIKNILVCEGVQRLERHEKLSQWEMHMQRCEVD 384
                       ***************************************887.7999********************************************** PP

              GRAS 326 pvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                        vpls +a  + k  l  ++ +  + +e+++ l+l+W   +L+s+SaWr
  TRIDC4AG029720.1 385 HVPLSFEAIREGKERLMSYGLKQCKSDEDNADLLLCWGATRLYSISAWR 433
                       ********************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MHGLCAHEQG TVDDLAHLGP ALYECMAHVI EGSFEKTDRS LRKIRKLASL VDGPLQRLSM  60
IIADSLARRL LCPIQGFAAA LIDPSRYLEQ ACLRSARENF ASISPYLSTG FVTINRAMLE  120
QVQDQKVVRI VDLSCSTTHP WQWLKILHDF HGRPGGPPEL RLTVVHEDSE FLDNMQALLC  180
RQAANLKLCF YFDKVIGKLE TLDFSNLREI LKINFGEAVV ISCALQMHRL LAVDDSVSRD  240
GIAQLQQMAN MARLKQMACS ACSPASTLNY PQTPSPQRQI PSLLVSFLSA IRALEPKIIV  300
MMEQDADHNA PLFHDRFTKT VDYYAALFDS LNAVDSASPQ RARVERVLLG EEIKNILVCE  360
GVQRLERHEK LSQWEMHMQR CEVDHVPLSF EAIREGKERL MSYGLKQCKS DEDNADLLLC  420
WGATRLYSIS AWRPHSSNAA PNKVAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.13e-74GRAS family protein