PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG032020.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 857aa MW: 92816.2 Da PI: 6.3601

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG032020.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.3	0.00066	662	699	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLre++P+ a K s + Lek+v+++ Lq TRIDC4AG032020.10 662 RQLIQDRIKELREMVPNgA------KCSIDALLEKTVKHMLFLQ 699 67799**********66......999999******99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 857 aa Download sequence
MCRHLVWEDG YCGHTPCPAG SEASQARAAE LGCSAAVDSI CSLVRKDMAE QVHVVGEGTI 60 GRVAFTGSHQ WIIHGTADDH GLSSEVASEM HYQFRAGIKT IAIIPVLPRG VLQLGSTGVV 120 VENTSFVMHA KKLCSQLNQR SSMAASASVK STSNQSRPLH GASNIQAADN SFSQFPVMRE 180 QYRRSDSATA SSSKSLNASL FEAAQQNGLT GREHIVYGKP NDMFLQQASY CDSRLGSNTL 240 SAAISSDLVP SSLASVEQQQ MLMNTIGQLE FGSGADLARS ALLKSLLYRN PFMHETSDMK 300 LSHGRVGLSQ GTTGHGSYGF LPGSAGVVST TLCTSSQVSE QGSHSSSGML RQKQPPVSCN 360 VPQSSEFTMK MVRQERSSES ALPVSSQSDA QVSNCLNGIS QENLLSRSGH MQKDQNANRA 420 NDTRVAVSTQ GVKNVDGCML PAMPSETAHS LLLQPTWDND LFDIFGSEFH QLGHNVDANL 480 VSSCDAKSHS LDRDAAEPSI CLDSSSLFSS LDNDFPCSGI FSLTDTDQLL DAVISNVNPS 540 SKQSSDDNAS CKTALTDIPN ISHFGLEELK QCDSSGIPST VIKNESTQIV RQPYYFDKTE 600 DGCLSQNNGA QKSQIRLWIE NGQNMKCESA SASNSKGLDT QSKSNRKRSR PGESSKARPK 660 DRQLIQDRIK ELREMVPNGA KCSIDALLEK TVKHMLFLQS VTKHADKLKD STESKILGSE 720 NGPVWKDYFE GGATWAFDVG SQSMTCPIIV EDLDRPRQML VEMICEDRGI FLEIADFIKG 780 LGLTILRGVM EARKSKIWAR FTVEANRDVT RMEIFLSLVR LLEPNCDGSG AVENPNSVNM 840 PLGLVRQPVI PATGGIQ

Sequence ? help Back to Top

Protein Sequence Length: 857 aa Download sequence

MCRHLVWEDG YCGHTPCPAG SEASQARAAE LGCSAAVDSI CSLVRKDMAE QVHVVGEGTI  60
GRVAFTGSHQ WIIHGTADDH GLSSEVASEM HYQFRAGIKT IAIIPVLPRG VLQLGSTGVV  120
VENTSFVMHA KKLCSQLNQR SSMAASASVK STSNQSRPLH GASNIQAADN SFSQFPVMRE  180
QYRRSDSATA SSSKSLNASL FEAAQQNGLT GREHIVYGKP NDMFLQQASY CDSRLGSNTL  240
SAAISSDLVP SSLASVEQQQ MLMNTIGQLE FGSGADLARS ALLKSLLYRN PFMHETSDMK  300
LSHGRVGLSQ GTTGHGSYGF LPGSAGVVST TLCTSSQVSE QGSHSSSGML RQKQPPVSCN  360
VPQSSEFTMK MVRQERSSES ALPVSSQSDA QVSNCLNGIS QENLLSRSGH MQKDQNANRA  420
NDTRVAVSTQ GVKNVDGCML PAMPSETAHS LLLQPTWDND LFDIFGSEFH QLGHNVDANL  480
VSSCDAKSHS LDRDAAEPSI CLDSSSLFSS LDNDFPCSGI FSLTDTDQLL DAVISNVNPS  540
SKQSSDDNAS CKTALTDIPN ISHFGLEELK QCDSSGIPST VIKNESTQIV RQPYYFDKTE  600
DGCLSQNNGA QKSQIRLWIE NGQNMKCESA SASNSKGLDT QSKSNRKRSR PGESSKARPK  660
DRQLIQDRIK ELREMVPNGA KCSIDALLEK TVKHMLFLQS VTKHADKLKD STESKILGSE  720
NGPVWKDYFE GGATWAFDVG SQSMTCPIIV EDLDRPRQML VEMICEDRGI FLEIADFIKG  780
LGLTILRGVM EARKSKIWAR FTVEANRDVT RMEIFLSLVR LLEPNCDGSG AVENPNSVNM  840
PLGLVRQPVI PATGGIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	7e-53	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG032020.10