PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG033340.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 475aa    MW: 52351.3 Da    PI: 4.8694
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG033340.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS219.51.7e-671044662373
               GRAS   2 velLlecAeavssgdlelaqalLarlsel..aspdg...dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                        ++lLl+ Aeav++gd + a a+ +rl  l   sp+     ++ Rla +f+++L++r+++      ++ ++s+ +    s++++a+++ +e+s
  TRIDC4AG033340.11 104 TDLLLTGAEAVEAGDPRFALAVFSRLDGLllGSPENaaaGSFDRLAYHFAQGLRSRISS------ASTSCSPPE-PLASDRMSAQQIIQELS 188
                        689***********************998885554422379*****************9......333333333.247999*********** PP

               GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                        P+ kf+h+taNqaIl+a++g+++vH++D++i++G+QWp+++  La    g  s+ +T++ + +       ++ ++rL++fA++l++pf+++ 
  TRIDC4AG033340.11 189 PFAKFAHFTANQAILDATKGDTHVHVVDLNIGEGIQWPSFMSDLARH--GGMSFHLTAITADADYTDGVHHASARRLSEFADSLNLPFQYSC 278
                        *********************************************84..6689********777788899999******************* PP

               GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevL.klvkslsPkvvvvveqeadh.nse......sFlerflealeyy 264
                        l  ++ e  +l+e++ + + +++ ++    +       +l s+ +++L  +vk l+Pk++vvve+e+ + ++e      sF++ f+eal+++
  TRIDC4AG033340.11 279 LCLHSDE--DLHEFSKNCKGSVIFSCDTTSMPY-----KLLSKLPALLpACVKLLQPKLMVVVEEELVRiGKEvslckaSFVDFFFEALHHF 363
                        8555444..458888888999999998855444.....45566778883579*************95554555666666************* PP

               GRAS 265 salfdsl.eaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee 354
                        +++f+sl +  ++ ++    + vEre++g++i++ v + g++ +e +       + le+ G  +  ls  +++qa++l+  ++ +g++v +e
  TRIDC4AG033340.11 364 TTVFESLaSCFVGGNQgACLRLVEREMVGPRIQDFVGQYGSMTVEVTA-----PRVLERYG--ACDLSGCNVAQARMLVGLFN-RGFEVVHE 447
                        *******555555555677899*******************9666655.....67888877..8999****************.******** PP

               GRAS 355 sgslvlgWkdrpLvsvSaW 373
                        +g lvl+Wk+rpL+svS+W
  TRIDC4AG033340.11 448 KGRLVLCWKSRPLTSVSVW 466
                        ******************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
KMETMSYPCS PLLSLPTHEE SSFFMWSPQV ALHENATIHV DHPTDQQPDN VFLDTAAQDY  60
ANDWHQQDAS DLGVFTYCDE RILGQESGNL VAIQEELMEE NSLTDLLLTG AEAVEAGDPR  120
FALAVFSRLD GLLLGSPENA AAGSFDRLAY HFAQGLRSRI SSASTSCSPP EPLASDRMSA  180
QQIIQELSPF AKFAHFTANQ AILDATKGDT HVHVVDLNIG EGIQWPSFMS DLARHGGMSF  240
HLTAITADAD YTDGVHHASA RRLSEFADSL NLPFQYSCLC LHSDEDLHEF SKNCKGSVIF  300
SCDTTSMPYK LLSKLPALLP ACVKLLQPKL MVVVEEELVR IGKEVSLCKA SFVDFFFEAL  360
HHFTTVFESL ASCFVGGNQG ACLRLVEREM VGPRIQDFVG QYGSMTVEVT APRVLERYGA  420
CDLSGCNVAQ ARMLVGLFNR GFEVVHEKGR LVLCWKSRPL TSVSVWAPIL KERSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.12e-40GRAS family protein