PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG033340.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 378aa    MW: 41372.3 Da    PI: 6.043
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG033340.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS220.67.7e-6873692373
               GRAS   2 velLlecAeavssgdlelaqalLarlsel..aspdg...dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                        ++lLl+ Aeav++gd + a a+ +rl  l   sp+     ++ Rla +f+++L++r+++      ++ ++s+ +    s++++a+++ +e+s
  TRIDC4AG033340.12   7 TDLLLTGAEAVEAGDPRFALAVFSRLDGLllGSPENaaaGSFDRLAYHFAQGLRSRISS------ASTSCSPPE-PLASDRMSAQQIIQELS 91 
                        689***********************998885554422379*****************9......333333333.247999*********** PP

               GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                        P+ kf+h+taNqaIl+a++g+++vH++D++i++G+QWp+++  La    g  s+ +T++ + +       ++ ++rL++fA++l++pf+++ 
  TRIDC4AG033340.12  92 PFAKFAHFTANQAILDATKGDTHVHVVDLNIGEGIQWPSFMSDLARH--GGMSFHLTAITADADYTDGVHHASARRLSEFADSLNLPFQYSC 181
                        *********************************************84..6689********777788899999******************* PP

               GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevL.klvkslsPkvvvvveqeadh.nse......sFlerflealeyy 264
                        l  ++ e  +l+e++ + + +++ ++    +       +l s+ +++L  +vk l+Pk++vvve+e+ + ++e      sF++ f+eal+++
  TRIDC4AG033340.12 182 LCLHSDE--DLHEFSKNCKGSVIFSCDTTSMPY-----KLLSKLPALLpACVKLLQPKLMVVVEEELVRiGKEvslckaSFVDFFFEALHHF 266
                        8555444..458888888999999998855444.....45566778883579*************95554555666666************* PP

               GRAS 265 salfdsl.eaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee 354
                        +++f+sl +  ++ ++    + vEre++g++i++ v + g++ +e +       + le+ G  +  ls  +++qa++l+  ++ +g++v +e
  TRIDC4AG033340.12 267 TTVFESLaSCFVGGNQgACLRLVEREMVGPRIQDFVGQYGSMTVEVTA-----PRVLERYG--ACDLSGCNVAQARMLVGLFN-RGFEVVHE 350
                        *******555555555677899*******************9666655.....67888877..8999****************.******** PP

               GRAS 355 sgslvlgWkdrpLvsvSaW 373
                        +g lvl+Wk+rpL+svS+W
  TRIDC4AG033340.12 351 KGRLVLCWKSRPLTSVSVW 369
                        ******************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MEENSLTDLL LTGAEAVEAG DPRFALAVFS RLDGLLLGSP ENAAAGSFDR LAYHFAQGLR  60
SRISSASTSC SPPEPLASDR MSAQQIIQEL SPFAKFAHFT ANQAILDATK GDTHVHVVDL  120
NIGEGIQWPS FMSDLARHGG MSFHLTAITA DADYTDGVHH ASARRLSEFA DSLNLPFQYS  180
CLCLHSDEDL HEFSKNCKGS VIFSCDTTSM PYKLLSKLPA LLPACVKLLQ PKLMVVVEEE  240
LVRIGKEVSL CKASFVDFFF EALHHFTTVF ESLASCFVGG NQGACLRLVE REMVGPRIQD  300
FVGQYGSMTV EVTAPRVLER YGACDLSGCN VAQARMLVGL FNRGFEVVHE KGRLVLCWKS  360
RPLTSVSVWA PILKERSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-40GRAS family protein