PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG034120.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 454aa    MW: 50508.4 Da    PI: 8.9187
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG034120.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.34.4e-16811601398
                       TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                         rl +p +f  ++ + ++++   ++l+ +sg++W  +l      ++ ++ kGWkeFv+++ ++ g f++F++dgrs+f   v +f+
  TRIDC4AG034120.1  81 GERLKIPPSFN-QYlQDQPTG--VVSLKGQSGNTWLAEL--ASDNEGLFFVKGWKEFVRDHSIEMGHFLTFRYDGRSQF--SVVIFD 160
                       5689******8.665777666..7***************..888888******************************99..777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MVGNRRRELQ ERDRRRRELQ DSARREELGR ESREAAAAAA MAAAGKERAR EKGKGKEREN  60
GGEGGKFGQQ FARVFLPQLY GERLKIPPSF NQYLQDQPTG VVSLKGQSGN TWLAELASDN  120
EGLFFVKGWK EFVRDHSIEM GHFLTFRYDG RSQFSVVIFD GMCIEKPSAF HAKPRKNLVV  180
KIESGKGDMD INAADPSQVS AAPLEESNET TRKRVTEMDA DGSTSKKRSS ILENGMPEAS  240
AVTCKVASTS LNVDMNTADP PEAVVVPLEE SNQTTRKRVR EIDANGSALE KSLRVREIDE  300
NDSALHKSSR VREIDANDSA LHKSSRVREI DANDSALQKS SRVREIDAKD SALQKSSRVR  360
EIDANDSALQ KSSRVREIDA NDSALQKSSR VREIDANDSA LQKSCIASNK DKKRCPAASV  420
GTYKLLVAIH RHNSEGHLVC QYMQVFVRET ISEL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11318DRRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.18e-17B3 family protein