PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG035510.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 204aa MW: 22226.9 Da PI: 9.774

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG035510.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	140.7	1.2e-43	36	189	3	134
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksa 94 ++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+eWLlqqa+pai ++tgt++ +a+++ a+s + as ++aa+++ TRIDC4AG035510.1 36 VAKRPTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETVEWLLQQAEPAIVAATGTGTVPANFStLAASLRPGAS----SRAAPFQ 124 689************************************************************9999988854444444444....3333333 PP TCP 95 a.kskksqksaasalnlakesr........................akarararertrekmrikn 134 + ++++q++ a++l ++ +++ a + +r+r+r++++ ++++ TRIDC4AG035510.1 125 HhLQHQPQHDVAAMLGFHGHHQhqllppppqqqhhhqhpeapqdpgAGEFMRKRYREADDLFKDT 189 33666666666666666665554566666666666666665556669999999999998887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
FMGSLAMVPA ATPAGAQTAN HSQSITVAEP PSEKKVAKRP TKDRHTKVDG RGRRIRMPAL 60 CAARVFQLTR ELGHKTDGET VEWLLQQAEP AIVAATGTGT VPANFSTLAA SLRPGASSRA 120 APFQHHLQHQ PQHDVAAMLG FHGHHQHQLL PPPPQQQHHH QHPEAPQDPG AGEFMRKRYR 180 EADDLFKDTG RHQDPEGGGE PAQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72010.1	6e-48	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG035510.1