PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG036900.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 521aa    MW: 58578.4 Da    PI: 8.914
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG036900.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.36e-1827111999
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       + ++++++v+p +fa+++ gk   ++t++le ++g  ++v +  + +++r v+++GW+ Fv+an++ ++D+++F++ g+s+f  +v vf++
  TRIDC4AG036900.1  27 SKSSRHCMVIPERFAKHFAGK--MPRTVKLEGPNGILYDVGV--TEHRNRKVIQSGWEVFVDANDIVQKDSLMFRYRGSSRF--KVAVFDS 111
                       3455667********888888..5569***************..********************************998888..9999986 PP
2B334.53.5e-112953781599
                       -EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  15 rlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                        l++ k++a +h   ++es  ++l+ +   ++W  ++ y+++++ + +++ W +Fv +n ++egD+++F   +   +f+++v+++r+
  TRIDC4AG036900.1 295 SLTIMKEYAVAHF--PHESASVILQRPGEnKRWYPRF-YEGNDSIHKIRGEWLDFVCDNSVEEGDICIFVPAKGgGRFTFTVHLLRA 378
                       48999****9997..446778999995555*******.8999999*************************776669******99986 PP
3B355.41.1e-174505182999
                       -..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  29 kkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                       +kee    +l +++g++W+ ++ +r++++r vl++GW +Fv++n+L++gD+++F+l+++ ++ ++ v+++++
  TRIDC4AG036900.1 450 PKEE--RTILLQRKGEEWQTQMHIRNGRRR-VLEGGWHKFVSDNRLRVGDICLFELKRNrRKLTMIVHIISR 518
                       3333..4677889*********77777766.7999**********************998*******99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    
MNNSCQGCKR YWNHLHGKVT CFVRRMSKSS RHCMVIPERF AKHFAGKMPR TVKLEGPNGI  60
LYDVGVTEHR NRKVIQSGWE VFVDANDIVQ KDSLMFRYRG SSRFKVAVFD SSGCEKTVPC  120
FGIGSSMSDQ PITNSTGMSG SSSDRNTHSS MGQQSDGCQS ESSGHCRKLA WTDAASSPSE  180
DLPGEDSPYE HESSGSDDHT LPKMISTVRI KEEQCSDASG RSDGCHSGST RKTAVISTPS  240
AESGPPKDKY VLSSRSNLAD AQKEKIDKLL QDVQSRTLAF VAIMRKSNVQ PPYPSLTIMK  300
EYAVAHFPHE SASVILQRPG ENKRWYPRFY EGNDSIHKIR GEWLDFVCDN SVEEGDICIF  360
VPAKGGGRFT FTVHLLRAES KAHAGHFVPP YMLSQMSFLS PLQQSIVEDK AEAIQLEAHL  420
YVAIMNKTNV GVKGHYSLEF GAKYAAVYLP KEERTILLQR KGEEWQTQMH IRNGRRRVLE  480
GGWHKFVSDN RLRVGDICLF ELKRNRRKLT MIVHIISRDQ C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1502509LKRNRRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-16B3 family protein