PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG038090.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 228aa    MW: 26216.5 Da    PI: 6.2765
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG038090.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.33.7e-15361141297
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                       k + +++p++  ++    ++ s t++l +++gr+++v +  +   g+ vl++GW  Fv a++++e+D+++F ++g+s+f   +++f
  TRIDC4AG038090.2  36 K-NSIRIPRELSTHLR--SRISDTIKLDTPNGRTYDVVV--TWEFGELVLRSGWDAFVTAHHIEENDTFLFIYHGNSNF--EIHIF 114
                       3.5599**99874444..45888****************..556667****************************9999..66666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MNGDCENCAF WRDHYYWEHM GDEKKQFSAV AKGDFKNSIR IPRELSTHLR SRISDTIKLD  60
TPNGRTYDVV VTWEFGELVL RSGWDAFVTA HHIEENDTFL FIYHGNSNFE IHIFNSRSCE  120
KMASCFQPPS EIFGAFPPSE PCDHHVLNAE PNPRHVQTQV EFDYTMSTGC YLTKSQDEKV  180
VEIARKIRSE IPLYVAIMKK LNVNVKDCSI VSCIFSVSFL GYASHSNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.18e-24B3 family protein