PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG038090.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 359aa    MW: 40515.6 Da    PI: 6.608
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG038090.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.19.1e-15361141297
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                       k + +++p++  ++    ++ s t++l +++gr+++v +  +   g+ vl++GW  Fv a++++e+D+++F ++g+s+f   +++f
  TRIDC4AG038090.7  36 K-NSIRIPRELSTHLR--SRISDTIKLDTPNGRTYDVVV--TWEFGELVLRSGWDAFVTAHHIEENDTFLFIYHGNSNF--EIHIF 114
                       3.55999*99874444..45888****************..556667****************************9999..66666 PP
2B338.81.7e-12203287997
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                        + k + + +p + + +h +++++s  ++le + g+ ++v+   +k+s+  +vl++ W  Fv an+++ +D ++F+ +   +++l+v ++
  TRIDC4AG038090.7 203 VNVKDCSINIPLRLV-SHLKEEAGSAIIKLEAPGGNIYNVRA--SKHSEDqVVLQSDWDAFVAANHIQLNDLLIFHSK--GKTSLKVLAL 287
                       46678999******9.776678999*****************..7777777*************************44..4555566665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MNGDCENCAF WRDHYYWEHM GDEKKQFSAV AKGDFKNSIR IPRELSTHLR SRISDTIKLD  60
TPNGRTYDVV VTWEFGELVL RSGWDAFVTA HHIEENDTFL FIYHGNSNFE IHIFNSRSCE  120
KMASCFQPPS EIFGAFPPSE PCDHHVLNAE PNPRHVQTQV EFDYTMSTGC YLTKSQDEKV  180
VEIARKIRSE IPLYVAIMKK LNVNVKDCSI NIPLRLVSHL KEEAGSAIIK LEAPGGNIYN  240
VRASKHSEDQ VVLQSDWDAF VAANHIQLND LLIFHSKGKT SLKVLALDPS GCEKNSSCFD  300
TKKISKTGEG SVQITDARPC TVEIIDLTSS DDDHTEREDA GRSSGRRKQV PGSHAKARK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.13e-23B3 family protein