PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG038090.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 155aa    MW: 17943.9 Da    PI: 5.2175
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG038090.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.61.4e-15401191298
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       k + +++p++  ++    ++ s t++l +++gr+++v +  +   g+ vl++GW  Fv a++++e+D+++F ++g+s+f   +++f+
  TRIDC4AG038090.9  40 K-NSIRIPRELSTHLR--SRISDTIKLDTPNGRTYDVVV--TWEFGELVLRSGWDAFVTAHHIEENDTFLFIYHGNSNF--EIHIFN 119
                       3.5599**99874444..45888****************..556667****************************9999..666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
GYCEMNGDCE NCAFWRDHYY WEHMGDEKKQ FSAVAKGDFK NSIRIPRELS THLRSRISDT  60
IKLDTPNGRT YDVVVTWEFG ELVLRSGWDA FVTAHHIEEN DTFLFIYHGN SNFEIHIFNS  120
RSCEKMASCF QPPSEIFGAF PPSEPCDHHV LNDAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-24B3 family protein