PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG038200.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 384aa    MW: 43734.2 Da    PI: 9.312
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG038200.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.12.1e-1568159196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       f+ v+ + +v+ ++ l+++kk++++h g+ke+   + l ++ g++W+v++  + + +   + +GW++Fvk+n++++gD+++F+l +  +  ++
  TRIDC4AG038200.4  68 FVAVMRRFNVTGTCTLTFSKKYVQTHVGDKERR--ICL-QRCGKRWDVQF--SSSVEVKRIVSGWRKFVKDNDVETGDICIFELLKIdEMCTM 155
                       5566777789999*************7787664..665.569********..5555556688*********************7644354456 PP

                       EEEE CS
                B3  93 vvkv 96 
                        v++
  TRIDC4AG038200.4 156 EVHI 159
                       6666 PP
2B343.36.5e-14289379599
                       -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
                B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
                       + + +v+ +  l+++kk++++h g++ +s  +    ++g++ +v+l   ++++     +GW +F+k+ngL++gD++++++ ++ +e +++v++
  TRIDC4AG038200.4 289 MQKTNVTGRFALSISKKYVRRHLGDEVRS--IW-LERDGERCQVTL--GRGPQNNRVVGGWVKFAKENGLRTGDVCLLERLRHcKECTMKVHI 376
                       56678888999***********8887776..55.457*********..9999999999*********************99988999999999 PP

                       E-S CS
                B3  97 frk 99 
                       +r+
  TRIDC4AG038200.4 377 VRR 379
                       987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MGLLEYGQRD SAESFRYSHT GDSLSSEHDI EGCASPRYTL IYNTSLNTVQ KEEVDEQVKS  60
IHKDNPIFVA VMRRFNVTGT CTLTFSKKYV QTHVGDKERR ICLQRCGKRW DVQFSSSVEV  120
KRIVSGWRKF VKDNDVETGD ICIFELLKID EMCTMEVHII HAKDFDRPSQ IGGRSVDGWC  180
KEATTKTVEP SHSRPQLVKM QLRNASVEDS YSRPQPMEMQ SPSKERKIRV ETVNSSLGNE  240
GDSSMSEDSV TLTGCIGVHL RRIPLIQKKV VKQKVDLIGS EIPICVLVMQ KTNVTGRFAL  300
SISKKYVRRH LGDEVRSIWL ERDGERCQVT LGRGPQNNRV VGGWVKFAKE NGLRTGDVCL  360
LERLRHCKEC TMKVHIVRRV KRAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.13e-09B3 family protein