PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG038200.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 670aa    MW: 76430.6 Da    PI: 7.5617
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG038200.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.48.4e-16341121498
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       + +++p +f++++ g+   +++++l++++g s+++ +   k++++ vl++GW+ Fvk  +L   D vvF+++g+s+f   v vf+
  TRIDC4AG038200.5  34 QEMIVPDEFLRRFRGE--IPREIRLQTRNGHSYTIGV--AKYPDKLVLQAGWETFVKTYDLHMDDCVVFRYKGNSQF--DVIVFD 112
                       46899********776..6779***************..**********************************9999..776666 PP
2B346.95.1e-15354445196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       f+ v+ + +v+ ++ l+++kk++++h g+ke+   + l ++ g++W+v++  + + +   + +GW++Fvk+n++++gD+++F+l +  +  ++
  TRIDC4AG038200.5 354 FVAVMRRFNVTGTCTLTFSKKYVQTHVGDKERR--ICL-QRCGKRWDVQF--SSSVEVKRIVSGWRKFVKDNDVETGDICIFELLKIdEMCTM 441
                       5566777789999*************7787664..665.569********..5555556688*********************7644354446 PP

                       EEEE CS
                B3  93 vvkv 96 
                        v++
  TRIDC4AG038200.5 442 EVHI 445
                       6666 PP
3B342.11.6e-13575665599
                       -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
                B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
                       + + +v+ +  l+++kk++++h g++ +s  +    ++g++ +v+l   ++++     +GW +F+k+ngL++gD++++++ ++ +e +++v++
  TRIDC4AG038200.5 575 MQKTNVTGRFALSISKKYVRRHLGDEVRS--IW-LERDGERCQVTL--GRGPQNNRVVGGWVKFAKENGLRTGDVCLLERLRHcKECTMKVHI 662
                       56677888999***********8887776..55.457*********..9999999999*********************99988999999999 PP

                       E-S CS
                B3  97 frk 99 
                       +r+
  TRIDC4AG038200.5 663 VRR 665
                       987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 670 aa     Download sequence    
MGCERCERRD ELDYCNLDDR EKHFLMFIVD DCGQEMIVPD EFLRRFRGEI PREIRLQTRN  60
GHSYTIGVAK YPDKLVLQAG WETFVKTYDL HMDDCVVFRY KGNSQFDVIV FDRFGREKAF  120
SVIRDSAPPV QESHNSGTEN LDRSHGHSQP MEVQSPIENA NHPEGRPQPM RMQPPTENAN  180
PSHAHPQPMR MQPPTENLDD PVGFSPPTEN VNNLFGHSQP TQMQPSTEAV HHFAQMQPST  240
EAVDHSNGHA LTMQMQPSSE VVDHSNGHAQ TMQMQLFCRP TKLRQTMLQW DYSSMGNETA  300
PSPSDTPNSL SSEHDIEGCA SPRYTLIYNT SLNTVQKEEV DEQVKSIHKD NPIFVAVMRR  360
FNVTGTCTLT FSKKYVQTHV GDKERRICLQ RCGKRWDVQF SSSVEVKRIV SGWRKFVKDN  420
DVETGDICIF ELLKIDEMCT MEVHIIHAKD FDRPSQIGGR SVDGWCKEAT TKTVEPSHSR  480
PQLVKMQLRN ASVEDSYSRP QPMEMQSPSK ERKIRVETVN SSLGNEGDSS MSEDSVTLTG  540
CIGVHLRRIP LIQKKVVKQK VDLIGSEIPI CVLVMQKTNV TGRFALSISK KYVRRHLGDE  600
VRSIWLERDG ERCQVTLGRG PQNNRVVGGW VKFAKENGLR TGDVCLLERL RHCKECTMKV  660
HIVRRVKRAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-14B3 family protein