PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG038200.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 356aa MW: 40422.2 Da PI: 6.1553

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG038200.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.7	2.7e-15	264	344	1	86
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+ v+ + +v+ ++ l+++kk++++h g+ke+ + l ++ g++W+v++ + + + + +GW++Fvk+n++++gD+++F+l + TRIDC4AG038200.8 264 FVAVMRRFNVTGTCTLTFSKKYVQTHVGDKERR--ICL-QRCGKRWDVQF--SSSVEVKRIVSGWRKFVKDNDVETGDICIFELLK 344 5566777789999***********7787664..665.569****..5555556688*******************764 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MDDCVVFRYK GNSQFDVIVF DRFGREKAFS VIRDSAPPVQ ESHNSGTENL DRSHGHSQPM 60 EVQSPIENAN HPEGRPQPMR MQPPTENANP SHAHPQPMRM QPPTENLDDP VGFSPPTENV 120 NNLFGHSQPT QMQPSTEAVH HFAQMQPSTE AVDHSNGHAL TMQMQPSSEV VDHSNGHAQT 180 MQMQLFCRPT KLRQTMLQWD YSSMGNETAP SPSDTPRDSL SSEHDIEGCA SPRYTLIYNT 240 SLNTVQKEEV DEQVKSIHKD NPIFVAVMRR FNVTGTCTLT FSKKYVQTHV GDKERRICLQ 300 RCGKRWDVQF SSSVEVKRIV SGWRKFVKDN DVETGDICIF ELLKIDEMCT MEVHII

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MDDCVVFRYK GNSQFDVIVF DRFGREKAFS VIRDSAPPVQ ESHNSGTENL DRSHGHSQPM  60
EVQSPIENAN HPEGRPQPMR MQPPTENANP SHAHPQPMRM QPPTENLDDP VGFSPPTENV  120
NNLFGHSQPT QMQPSTEAVH HFAQMQPSTE AVDHSNGHAL TMQMQPSSEV VDHSNGHAQT  180
MQMQLFCRPT KLRQTMLQWD YSSMGNETAP SPSDTPRDSL SSEHDIEGCA SPRYTLIYNT  240
SLNTVQKEEV DEQVKSIHKD NPIFVAVMRR FNVTGTCTLT FSKKYVQTHV GDKERRICLQ  300
RCGKRWDVQF SSSVEVKRIV SGWRKFVKDN DVETGDICIF ELLKIDEMCT MEVHII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	3e-09	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG038200.8