PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG040020.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 240aa    MW: 26729.3 Da    PI: 8.1274
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG040020.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.7e-1196144355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC4AG040020.10  96 NSHSLAERLRRKKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 144
                        58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MEMAIILAGA FSQNIQMSDE HSGGVKKRKG TDDCIALLNN VGDQQTEVSS QPERNSVERD  60
NRKISPKTQS KEDSSDGDGT KENYVHFRAK RGQATNSHSL AERLRRKKIS ERMKLLQDLV  120
PGCNKITGKA VMLDEIINYV QSLQRQVEFL SMKLATVNPE LGFDIEQILS KQMMLSQDRR  180
LGFYGADPGS SALIAHFNQG MMHPDMICNA SNPAGALHGT IHDISMMNQV NSVHFHGNRM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-56bHLH family protein