PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG040340.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 344aa MW: 37367.1 Da PI: 5.6921

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG040340.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.3e-12	167	214	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h +ErrRR+++ ++f L +++P + kK++Ka++L A++Y+k Lq TRIDC4AG040340.2 167 QDHILAERRRREKLSERFIALSKIVPGL-----KKMDKASVLGDAIKYVKTLQ 214 67999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MATQWFSNMV MDEPSFFHQW QSDATLEQYT EQQIAVAFGQ GEMEAAALMQ QQQQQQYAAA 60 AAGEHRPRKA AKVNTSWDSC VTEQGSPADS SSPTILSFGG HAHADAFAKA PQAPSAATAY 120 YGAAAPVKPK QEVDAGGVAP FQQVKRSYDA MAAEPARAPS RPAAQNQDHI LAERRRREKL 180 SERFIALSKI VPGLKKMDKA SVLGDAIKYV KTLQEQVKGM EEVARRRPVE SAVLVKKSQL 240 AADEDDGSSC DENFEGADAG LPEIEARMSD RTVLVKIHCE NRRGVLVAAL SELESIDLAI 300 MNTNVLPFTA SSIDITIMAT AGEDFSLSVK DIVRKLHQAF KSSP

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MATQWFSNMV MDEPSFFHQW QSDATLEQYT EQQIAVAFGQ GEMEAAALMQ QQQQQQYAAA  60
AAGEHRPRKA AKVNTSWDSC VTEQGSPADS SSPTILSFGG HAHADAFAKA PQAPSAATAY  120
YGAAAPVKPK QEVDAGGVAP FQQVKRSYDA MAAEPARAPS RPAAQNQDHI LAERRRREKL  180
SERFIALSKI VPGLKKMDKA SVLGDAIKYV KTLQEQVKGM EEVARRRPVE SAVLVKKSQL  240
AADEDDGSSC DENFEGADAG LPEIEARMSD RTVLVKIHCE NRRGVLVAAL SELESIDLAI  300
MNTNVLPFTA SSIDITIMAT AGEDFSLSVK DIVRKLHQAF KSSP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	178	ERRRRE
2	174	179	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	6e-55	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG040340.2