PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG041030.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 211aa    MW: 23907.5 Da    PI: 6.8589
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG041030.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.89.4e-172770146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      r ++++eE+ell+  ++ +G++ W+ Iar ++ gRt++ +k++w+ 
  TRIDC4AG041030.3 27 RSPFSEEEEELLLASHRVHGNR-WAVIARLFP-GRTDNAVKNHWHV 70
                      789*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MTCCVCDFSG KSCRLRWFNQ LDPRINRSPF SEEEEELLLA SHRVHGNRWA VIARLFPGRT  60
DNAVKNHWHV IMARRCRERM RLSSNRRATP AAASTTTAGA EKDESPKNTT GGEKPRLPET  120
NTMAALLHKY RREFAAPFAI SHHSSKEGYC SSTNEDTNRS VEFYDFLQVN VSSSDTKCGS  180
SIEENRDDDD DQQAEGQVSL IDFMEVGTSR Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73410.12e-44MYB family protein