PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG041150.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 488aa MW: 51223.1 Da PI: 4.6751

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG041150.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.2	2.2e-11	305	347	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +ErrRR+++N+++ Lr+++P + K++ a+iL A+eY+k+L TRIDC4AG041150.2 305 LAERRRRKKLNDRLYALRSVVPRiS------KMDRASILGDAIEYLKEL 347 58*******************66......**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MLPQFNTCLW VQEGDVHEHQ GLGHDQAALM GLEAGNHHDQ HLLPMPSGGG GGFGAPPMLD 60 DDSWYFDAVG DAAGNGSMIP APATVEASGS SSGFGDASQM FPLLDVPGFD LDISGDLSAF 120 LGAGNAPNAS LLPHGNTDFL GSFGGFGTAP AQTTDFGDLA GFDLFDTGAP GWSGPSSEGP 180 AAPAPQTAAF SGQGNAKVLR PLENFPASGA QPTLFQKRAL RRNAGEEDGG RKRKAAEPDI 240 ILDDADDDII SIDASGLNYD SEDGRGVEES GRKDGNESNA NSTVTGGAAA EGNGKKKGMP 300 AKNLLAERRR RKKLNDRLYA LRSVVPRISK MDRASILGDA IEYLKELKQK INVLQNELEA 360 SPSASSLPPT PTSIHPLAPT TPTMPALPSR VKEELTSSPA QEPCVEVKLR EGRAVNIRMM 420 CSRRPGVVHS SLKALEGLGL DVQQAVISYF NDFTLDVFKA EQCKDGPGPQ AEEIKAVLLK 480 SAGFQPAA

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MLPQFNTCLW VQEGDVHEHQ GLGHDQAALM GLEAGNHHDQ HLLPMPSGGG GGFGAPPMLD  60
DDSWYFDAVG DAAGNGSMIP APATVEASGS SSGFGDASQM FPLLDVPGFD LDISGDLSAF  120
LGAGNAPNAS LLPHGNTDFL GSFGGFGTAP AQTTDFGDLA GFDLFDTGAP GWSGPSSEGP  180
AAPAPQTAAF SGQGNAKVLR PLENFPASGA QPTLFQKRAL RRNAGEEDGG RKRKAAEPDI  240
ILDDADDDII SIDASGLNYD SEDGRGVEES GRKDGNESNA NSTVTGGAAA EGNGKKKGMP  300
AKNLLAERRR RKKLNDRLYA LRSVVPRISK MDRASILGDA IEYLKELKQK INVLQNELEA  360
SPSASSLPPT PTSIHPLAPT TPTMPALPSR VKEELTSSPA QEPCVEVKLR EGRAVNIRMM  420
CSRRPGVVHS SLKALEGLGL DVQQAVISYF NDFTLDVFKA EQCKDGPGPQ AEEIKAVLLK  480
SAGFQPAA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	295	313	KKKGMPAKNLLAERRRRKK
2	307	314	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-69	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG041150.2