PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG042210.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 620aa    MW: 65185.2 Da    PI: 4.7485
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG042210.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS463.99.3e-1422326161374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl...fsevsPi 90 
                       lv++Ll+cAeav+++++++a+al++++  la+++g +m+++aayf eALa+r++r        ++p+++s  +  ++++a+ l   f+e +P+
  TRIDC4AG042210.2 232 LVHALLACAEAVQQENFSAAEALVKQIPLLAASQGGAMRKVAAYFGEALARRVFR--------FRPQPDS--SLLDAAFADLLhahFYESCPY 314
                       689****************************************************........5555555..34444444444456******* PP

              GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                       lkf+h+taNqaIlea++g++rvH++Df+i+qG+QWpaLlqaLa Rp+gpps+R+Tgvg+p+++++++l+++g++La+fA++++v+f+++ lva
  TRIDC4AG042210.2 315 LKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVA 407
                       ********************************************************************************************* PP

              GRAS 184 krledleleeLrvkp.......gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269
                        +l+dle+ +L+ +         E++aVn+v+++hrll+++++le+    vL +v+ ++P++v+vveqea+hns++Fl+rf+e+l+yys++fd
  TRIDC4AG042210.2 408 ATLADLEPFMLQPEGeedpneePEVIAVNSVFEMHRLLAQPGALEK----VLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFD 496
                       ***********544444557789***********************....******************************************* PP

              GRAS 270 sleak..............lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sd 347
                       sle +              +p+++ +++++++++lgr+i+nvvacegaer+erhetl++Wr+rl++aGF++v+l+++a+kqa++ll+ ++ +d
  TRIDC4AG042210.2 497 SLEGGssggpsevssgaaaAPAAAGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAgGD 589
                       **98889**********9999999********************************************************************* PP

              GRAS 348 gyrveeesgslvlgWkdrpLvsvSaWr 374
                       gy+vee++g+l+lgW++rpL+++SaWr
  TRIDC4AG042210.2 590 GYKVEEKEGCLTLGWHTRPLIATSAWR 616
                       **************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 620 aa     Download sequence    
MKREYQDAGG SGGGGGMGSS EDKMMVSAAA GEGEEVDELL AALGYKVRAS DMADVAQKLE  60
QLEMAMGMGG VGAGAAPDDS FATHLATDTV HYNPTDLSSW VESMLSELNA PPPPLPPAPQ  120
QLNASTSSTV TGGGYFDLPP SVDSSCSTYA LRPIPSPAGA VGPADLSADS VRDPKRMRTG  180
GSSTSSSSSS SSSLGGGARS SVVEAAPPVA AGANAPALPV VVVDTQEAGI RLVHALLACA  240
EAVQQENFSA AEALVKQIPL LAASQGGAMR KVAAYFGEAL ARRVFRFRPQ PDSSLLDAAF  300
ADLLHAHFYE SCPYLKFAHF TANQAILEAF AGCRRVHVVD FGIKQGMQWP ALLQALALRP  360
GGPPSFRLTG VGPPQPDETD ALQQVGWKLA QFAHTIRVDF QYRGLVAATL ADLEPFMLQP  420
EGEEDPNEEP EVIAVNSVFE MHRLLAQPGA LEKVLGTVRA VRPRIVTVVE QEANHNSGTF  480
LDRFTESLHY YSTMFDSLEG GSSGGPSEVS SGAAAAPAAA GTDQVMSEVY LGRQICNVVA  540
CEGAERTERH ETLGQWRNRL GNAGFETVHL GSNAYKQAST LLALFAGGDG YKVEEKEGCL  600
TLGWHTRPLI ATSAWRLAAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.10.0GRAS family protein