PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG042270.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 352aa MW: 37935.4 Da PI: 7.6599

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG042270.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	155.6	2.8e-48	105	259	1	136
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.... 88 aa++kdrhski+T++g+RdRR+Rls+++a++fF+Lqd+LGfdk+skt++WLl+ +k ai e + + +++s+c e++sss s+ +++ TRIDC4AG042270.1 105 AAARKDRHSKICTAGGMRDRRMRLSLDVARKFFALQDMLGFDKASKTVQWLLNTSKGAIREVMTD--EASSDCeEDGSSSLSVVDGKHKppgt 195 589************************************************************..66667976666666655333335788 PP TCP 89 ................kaaksaakskksqksaasalnlakesrakarararertrekmriknkl 136 +a+++ a++k+++k a+++ ++kesr kar+rarertrek+r+++++ TRIDC4AG042270.1 196 eagggdhgegkkpmprAARRAPANPKPQRKLASAHPIPDKESRTKARERARERTREKNRMRWVT 259 8889999999995555555599999999999999999********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MFPFYDSPSP MDLPLYQQLQ ISPPSPKAPD HQSLLYYHSS PAFAADAFHH SYLCAGAATP 60 PAAEIDNQPP PELLLMDQAP APRADGVGTA QGLHGGGGLD SAAAAAARKD RHSKICTAGG 120 MRDRRMRLSL DVARKFFALQ DMLGFDKASK TVQWLLNTSK GAIREVMTDE ASSDCEEDGS 180 SSLSVVDGKH KPPGTEAGGG DHGEGKKPMP RAARRAPANP KPQRKLASAH PIPDKESRTK 240 ARERARERTR EKNRMRWVTL ASTINIEPAA TGMAAARADE LITRPHNFIN RSSSMNTASA 300 ELEEGCSSSM PSEAIVAGFG NGGYGSSGNY YQYQLEQQWE LAGVVFPNSQ PY

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MFPFYDSPSP MDLPLYQQLQ ISPPSPKAPD HQSLLYYHSS PAFAADAFHH SYLCAGAATP  60
PAAEIDNQPP PELLLMDQAP APRADGVGTA QGLHGGGGLD SAAAAAARKD RHSKICTAGG  120
MRDRRMRLSL DVARKFFALQ DMLGFDKASK TVQWLLNTSK GAIREVMTDE ASSDCEEDGS  180
SSLSVVDGKH KPPGTEAGGG DHGEGKKPMP RAARRAPANP KPQRKLASAH PIPDKESRTK  240
ARERARERTR EKNRMRWVTL ASTINIEPAA TGMAAARADE LITRPHNFIN RSSSMNTASA  300
ELEEGCSSSM PSEAIVAGFG NGGYGSSGNY YQYQLEQQWE LAGVVFPNSQ PY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	1e-24	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG042270.1