PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG043000.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 238aa    MW: 25965.3 Da    PI: 9.6951
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG043000.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA50.56.9e-16109143136
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrk 36 
                       +ep+YVNaKQy++Il+RRq+Rak+e e+k  +k+rk
  TRIDC4AG043000.2 109 EEPVYVNAKQYHGILRRRQSRAKAELERKA-IKARK 143
                       69***************************8.77776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
TTQGKKKTAD DDPRAESSDD DSQRSGEPKD GSFEVENQRA TSRMPALATD YLAPYSHLEL  60
NQPMASATYP YPDAYYTGMV GPYGAQAVAH FQLPGLTHPR MPLPLEVSEE PVYVNAKQYH  120
GILRRRQSRA KAELERKAIK ARKVSPANHL PRSFLPEPVF DLCFLLHCSL TSTSPGTSTR  180
CGGRGAPAAA SSTPRRTRTA PPMAAEPKQT KASRAPTISG CRRTCISVRR EVAPLDAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.11e-24NF-YA family protein