PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG043000.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 249aa    MW: 27942 Da    PI: 9.9685
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG043000.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.73.4e-32154210158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq+Rak+e e+k  +k+rkpylheSRh+hA+rR+Rg+gGrF
  TRIDC4AG043000.3 154 EEPVYVNAKQYHGILRRRQSRAKAELERKA-IKARKPYLHESRHQHAMRRARGTGGRF 210
                       69***************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
WDRGRERATW WSREGCRPAW RCSPGGRGQG SGPCLRPSWR PEAGRGSACR KKTADDDPRA  60
ESSDDDSQRS GEPKDGSFEV ENQRATSRMP ALATDYLAPY SHLELNQPMA SATYPYPDAY  120
YTGMVGPYGA QAVAHFQLPG LTHPRMPLPL EVSEEPVYVN AKQYHGILRR RQSRAKAELE  180
RKAIKARKPY LHESRHQHAM RRARGTGGRF LNTKKDENGA SNGGRTEANK GEQSSDYLRV  240
PPDLHLRQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.23e-41NF-YA family protein