PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG043800.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 391aa    MW: 43667.9 Da    PI: 6.0145
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG043800.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.82.9e-11153237997
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                        +lk + + lp k +e+++++ +++ t++le ++   + v+   +k+++  +vl+ GW++ v+an+++e+D +vF  +g  +++l v+++
  TRIDC4AG043800.7 153 VNLKDCSVNLPLKLVEHFKED-TSKATIQLEAPNDMIYGVEA--CKHGDDqIVLQYGWNNLVDANRIQENDLLVFITKG--TKRLEVRIL 237
                       45678999*******777666.5678****************..5555545*************************665..444577776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MISETIKLEA PNGIFLIGVC RKTGELVLRA GWDKFVAMHH IKENYSFWFV YRGNSTFKVH  60
IFNSNGHEKA TSCSKPPSES FGGVPPAATC DHHVLNEQVP SVSGNVQTST DSGYSMLPGC  120
HLTKAQDEKV RELACTMRSQ VPLYVAVMNK SNVNLKDCSV NLPLKLVEHF KEDTSKATIQ  180
LEAPNDMIYG VEACKHGDDQ IVLQYGWNNL VDANRIQEND LLVFITKGTK RLEVRILGTS  240
VHQRTSSCFD VGNISSTQEI REDSLEITDP PPHTDYYVSS SDDDHIMEEG YYVSSSDDDH  300
IAEEDYVSSS DADHIVEEGT RKSGRRQKQA PSRYAKAQKV ASTSSPSAAK SGYSAIYTSA  360
FSFYQFPNCF WLSYAYLMRV VQAFQDMKLT S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.15e-07B3 family protein